ROC Meeting in Cambridge - Presentations

Monday, January 5, 2009

Morning - Scope and Orthogonality

  • Introduction of Participants
  • Neocles Leontis - Overview of Aims and Proposed Scope of RNAO (RNA Ontology)

  • Colin Batchelor  - Progress on RNAO.owl so far
Presentation (.ppt)
  • Jane Richardson - Backbone Conformational States
Presentation (.ppt)

Coffee Break

  • Thomas Bittner - Underlying Ontologies for Biomedical work - The Relation Ontology (RO) and Basic Formal Ontology (BFO)
Presentation (.ppt)
  • Karen Eilbeck - Sequence ontology (SO) and Gene Ontology (GO)

  • Kirill Degtyarenko - Chemical Entities of Biological Interest (ChEBI) Ontology
Presentation (.ppt)

Lunch

Afternoon - Interoperability and Reasoning

  • Chris Mungall - Reasoners, OWL and ontology languages and their capabilities
Presentation (.pdf)
  • Alex Bateman - Rfam: A database of non-cooding RNA elements
Presentation (.ppt)


Tuesday, January 6, 2009

Morning - Using RNA data - Ontologies and Sequence Alignments

  • Rob Knight - Initial proposal for the RNA Alignment Ontology
Presentation (.ppt)

Coffee Break

  • Eckart Bindewald - 

  • Alain Laederach -


Lunch